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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015903852.1_cds_XP_016454003.1_48072
CDS Infomation

[gene=LOC107778294] [db_xref=GeneID:107778294] [protein=pto-interacting protein 1-like isoform X2] [protein_id=XP_016454003.1] [location=join(39524..39947,40039..40296,40379..40551,40644..40723,40833..40980,41820..42161)] [gbkey=CDS]
Sequence

ATGATTTGGGATTTTGGGTTGGCCTGTTTTATTCCGACTTGCCGGCGGCGAACTTCCGGC
GAGGATAACGGTGATAAGGATAAAGGTATTGTTAGCAGCAGTTTGGAGCATAATAAAGCT
TGGTTACTTGCTGAGTCAGGAGCTTGTGGTACTGAATTGATTAATGCTGAGCCACATTCA
CTTCACTCCTCTTTTAGGTTCAGTTTTTGTTCTCAGGTTGAGCTTGAGTCTATGAATATG
AATAGATGTTCCTCTGCTACTGTTTTGATGGTGAATTTGGATAATGGGTTGACTGATCCA
CTTTCCAGAGAGCTAAAATGGAGGAAAATTCAATCACTTGAGAGGAGTATTTCTCCTGTG
ACTCATTCTTTAATTAGGTTCACCTATGCTGAGATTGCTTCTGCTACTCGCTATTTTTCT
AAAGGTAGAGTTTTGGGGAGAGGAGCATTGAGCTATGTTTTCAGAGGAAGAGTGGGATTT
ATGAGGACAAGTGTTGCTATTAAGAAGTTAGATAGGGAAGATAAGGAATCTCCAAAGGCA
TTCTGTAGGGAATTGATGATTGCTAGTTCTCTTCATAACCCATACATTGTTCCTCTGGTT
GGTTTTTGCATTGATCCAGAGGAGGGTTTCTTTTTGGTCTACAAGTATGTATCTGGTGGA
AGCTTAGAGCGCTATTTACATGAGAAGAAGAGGGGAGTGAAAGGTGGTCCAGCGCTTCCA
TGGTCTACGCGGTATAAGGTGGCCGTAGGCATTGCAGAATCAATAGGGTATTTGCATTAT
GGAACTGAGAGGTGTGTTGTTCACAGGGACATCAAACCCTCCAACATTCTTCTCTCATCC
AAGAAAATACCCAAGTTGTGTGACTTTGGCTTAGCTACATGGACTCCTTCACCTTCTGTA
CCTTTCCTTTGTAAAACAGTTAAAGGAACATTCGGGTATTTAGCTCCTGAATATTTTCAG
CACGGTAAAATATCAGATAAAACTGATGTTTATGCCGTTGGAGTTGTCCTCCTGGAGCTG
CTAACTGGAAGGAAGCCAATTGAAGCGAAAAGAGGACCAGGAGAAGAAAACTTGGTGTTG
TGGGCAAAGCCTCTAATGCAGCAAGGAGCTCTTGAAAAGTTTCTTGATCCAAGACTCAAA
TTCCCTCAAAAGAATGTACAACAAATAGCTCGGATGACCCAAGCAGCAGCTGCATGTATA
CACAGTGAAGAGTCTCGAAGGTCCAATATGGACGAGATCATTGCCATATTGAGAGGCACA
GAACCTCGTTCCACGACCAGAAAGAAGTCTATTTCACGCAGTAATAGTTGTATGATTGAG
TGTTATCCCCAATTGCAGCGGACAAAAAGTGAAATGAAGAGTCACTTGGCCTTGGCAATG
TTAGGAGTTCCTGACTTCGAGGAGGAGGATTTTTATTGTCGTTGA

Peptide Sequence

PEP ID

XP_016454003.1
PEP Infomation

PREDICTED: pto-interacting protein 1-like isoform X2 [Nicotiana tabacum]
Sequence

MIWDFGLACFIPTCRRRTSGEDNGDKDKGIVSSSLEHNKAWLLAESGACGTELINAEPHS
LHSSFRFSFCSQVELESMNMNRCSSATVLMVNLDNGLTDPLSRELKWRKIQSLERSISPV
THSLIRFTYAEIASATRYFSKGRVLGRGALSYVFRGRVGFMRTSVAIKKLDREDKESPKA
FCRELMIASSLHNPYIVPLVGFCIDPEEGFFLVYKYVSGGSLERYLHEKKRGVKGGPALP
WSTRYKVAVGIAESIGYLHYGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTPSPSV
PFLCKTVKGTFGYLAPEYFQHGKISDKTDVYAVGVVLLELLTGRKPIEAKRGPGEENLVL
WAKPLMQQGALEKFLDPRLKFPQKNVQQIARMTQAAAACIHSEESRRSNMDEIIAILRGT
EPRSTTRKKSISRSNSCMIECYPQLQRTKSEMKSHLALAMLGVPDFEEEDFYCR

Transcript Sequence

Gene sequence data has not been registered.